plot.compare.CI <- function(x, CI, ylab = "Estimates", ...) { ## Purpose: Make a plot to compare point estimates and their confidence intervals ## (presumably derived from different methods) ## Arguments: ## x: a vector of point estimates ## CI: a matrix of CI's. Each column is a CI pair. ## 1st row is lower CI. 2nd row is upper CI ## ...: pass to the plot function. ## Return: a plot. ## Author: Feiming Chen ## ________________________________________________ require(gplots) ## Determine how best to put X-axis Labels -------------------- lx <- length(x) # number of point estimates if (lx > 7) { xlas <- 2 o <- par(mar = c(10, 4, 4, 2)) on.exit(par(o)) } li <- CI[1,] ui <- CI[2,] plotCI(x, li = li, ui = ui, barcol="blue", xaxt="n", xlab = "", ylab = ylab, sfrac = 0.005, xlim = c(0.7, lx + 0.3), ...) s <- 1:lx ss <- names(x) axis(side=1, at = s, labels= ss, tick = F, las = 0) ## put on numerical labels on the CI's. s1 <- s + 0.18 # offset ## median & CI labels text(s1, y = li, labels = round(li, 2)) text(s1, y = ui, labels = round(ui, 2)) text(s1, y = x, labels = round(x, 2)) } if (F) { # Unit Test x <- 1:3 names(x) <- c("A", "B", "C") CI <- matrix(c(0.8, 1.2, 1.7, 2.3, 2.9, 3.1), nrow = 2) plot.compare.CI(x, CI) }
Wednesday, October 20, 2021
Make a plot to compare point estimates and their confidence intervals
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